ZFIN is now using GRCz12tu for Genomic Data
Gene
thsd7bb
- ID
- ZDB-GENE-090708-2
- Name
- thrombospondin, type I, domain containing 7Bb
- Symbol
- thsd7bb Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be located in plasma membrane. Orthologous to human THSD7B (thrombospondin type 1 domain containing 7B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR044004 | Spondin-like TSP1 domain |
| Domain | IPR056991 | Thrombospondin type-1 domain-containing protein 7A/ 7B, C-terminal TSP1 domain |
| Family | IPR051418 | Spondin/Thrombospondin type-1 domain-containing |
| Homologous_superfamily | IPR036383 | Thrombospondin type-1 repeat superfamily |
| Repeat | IPR000884 | Thrombospondin type-1 (TSP1) repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Spondin-like TSP1 domain | Spondin/Thrombospondin type-1 domain-containing | Thrombospondin type-1 domain-containing protein 7A/ 7B, C-terminal TSP1 domain | Thrombospondin type-1 repeat superfamily | Thrombospondin type-1 (TSP1) repeat |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0AB32U0T7 | InterPro | 1643 | |||||
| UniProtKB:A0AB32U265 | InterPro | 1635 | |||||
| UniProtKB:A0AC58GTG6 | InterPro | 1075 | |||||
| UniProtKB:A0AC58GTG9 | InterPro | 1083 | |||||
| UniProtKB:A0AC58GTH3 | InterPro | 1075 | |||||
| UniProtKB:A0AC58GTI2 | InterPro | 1643 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
thsd7bb-201
(1)
|
Ensembl | 5,651 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance